System Resources Plasmid Components Cleavage

• List of all protease Cleavage sites that may be engineered into a fusion protein.

• Fields

• Add New Cleavage
• Remove Rows
• Copy Rows
• Cut Rows
• Paste Rows
• Undo
• Load Cleavage File
• Save Cleavage File
• Save Cleavage
• Close Cleavage
• Refresh Cleavage
• Display URL

• General Comments
• See Also

Fields

• Name is the name of the Cleavage.
• Amino Acid Sequence is the amino acid sequence of the Cleavage.
• URL is the URL for a web page for the Cleavage.

Add New Cleavage

This adds a new row to the Cleavage resource table.

1. Make the Cleavage window active in the Board.
2. On the Cleavage menu click Add New Cleavage.

Note

• The table must be saved before changes in the database occur.

Remove Rows

This removes the selected rows from the Cleavage resource table.

1. Make the Cleavage window active in the Board.
2. Select one or more rows in the table.
3. On the Cleavage menu click Remove Rows.

Note

• The table must be saved before changes in the database occur.

Copy Rows

This copies the data in the selected rows of the Cleavage resource table to local clipboard.

1. Make the Cleavage window active in the Board.
2. Select one or more rows in the table.
3. On the Cleavage menu click Copy Rows.

Note

• The table must be saved before changes in the database occur.

Cut Rows

This removes the selected rows of the Cleavage resource table and copies them to local clipboard.

1. Make the Cleavage window active in the Board.
2. Select one or more rows in the table.
3. On the Cleavage menu click Cut Rows.

Note

• The table must be saved before changes in the database occur.

Paste Rows

This adds the rows in local clipboard to the Cleavage resource table.

1. Make the Cleavage window active in the Board.
2. On the Cleavage menu click Paste Rows.

Note

• The table must be saved before changes in the database occur.

Undo

This cancels the last change to the Cleavage resource table.

1. Make the Cleavage window active in the Board.
2. On the Cleavage menu click Undo.

Note

• The table must be saved before changes in the database occur.

Load Cleavage File

This loads a comma separated value file and adds the data to the Cleavage resource table.

1. Make the Cleavage window active in the Board.
2. On the Cleavage menu click Load Cleavage File.
3. In the folder list, locate and open the folder that contains the file.
4. Click the file, and then click Open.

Note

• The CSV file consists of the header row followed by rows that contain comma separated data.
• To see the exact file format, do a save file for a table with entries.
• The data in the table will be replaced with the data in the file.
• The table must be saved before changes in the database occur.

Save Cleavage File

This saves the Cleavage resource table as a comma separated value file.

1. Make the Cleavage window active in the Board.
2. On the Cleavage menu click Save Cleavage File.
3. If you want to save the file in a different folder, locate and open the folder.
4. In the File Name box, type a name for the file.
5. Click Save.

Note

• The CSV file consists of the header row followed by rows that contain comma separated data.

Save Cleavage

This saves the Cleavage in the database.

1. Make the Cleavage window active in the Board.
2. On the Cleavage menu click Save Cleavage, or click the Save Cleavage button in the button bar.

Note

• This will replace the information for the current Cleavage in the database.

Close Cleavage

This closes the window.

1. Make the Cleavage window active in the Board.
2. On the Cleavage menu click Close Cleavage, or click the X button on the window's Title bar.

Note

• If the content of the View has been modified since the last Save operation, the user will be given an option to proceed and discard the changes, or to cancel the operation.

Refresh Cleavage

This reverts the data for the Cleavage to the version in the database.

1. Make the Cleavage window active in the Board.
2. On the Cleavage menu click Refresh Cleavage.

Note

• This will reload the Cleavage from the database.
• If the content of the View has been modified since the last Save operation, the user will be given an option to proceed and discard the changes, or to cancel the operation.

Display URL

This will display the web page from the URL field for the selected Cleavage in a browser.

1. Make the Cleavage window active in the Board.
2. On the Cleavage menu click Display URL.

Note

General Comments

• To open the Cleavage window in the Board, on the Options menu select System Resources then select Plasmid Components then click Cleavage.
• This System Resource is maintained by a Sesame user, usually a Sesame administrator, with a Can Do privilege.
• To give the Can Do privilege for this resource to user JoeSmith, execute the following SQL statement:
  insert into candothis values ('JoeSmith', 'SYS_RSC_PLASMIDCOMPONENTS', 'Sesame', 'SYS');
• To revoke the Can Do privilege for this resource from user JoeSmith, execute the following SQL statement:
  delete from candothis where user_name='JoeSmith' and what='SYS_RSC_PLASMIDCOMPONENTS' and ass_name='Sesame' and ass_type='SYS';

See also

Copyright © 1999-2008 Zsolt Zolnai, and the University of Wisconsin - Madison